DatasetSet_03_truncNotch_versus_normalThy.phenotype_truncNotch_versus_normalThy.cls
#truncNotch_versus_normalThy.phenotype_truncNotch_versus_normalThy.cls
#truncNotch_versus_normalThy_repos
Phenotypephenotype_truncNotch_versus_normalThy.cls#truncNotch_versus_normalThy_repos
Upregulated in classnormalThy
GeneSetNCI_HIV-1 NEF: NEGATIVE EFFECTOR OF FAS AND TNF-ALPHA
Enrichment Score (ES)-0.7320425
Normalized Enrichment Score (NES)-1.6842786
Nominal p-value0.0023809525
FDR q-value0.07331516
FWER p-Value0.35
Table: GSEA Results Summary



Fig 1: Enrichment plot: NCI_HIV-1 NEF: NEGATIVE EFFECTOR OF FAS AND TNF-ALPHA   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1NFKB1542035816632.059-0.0573No
2BID4590592 613000817831.950-0.0333No
3DFFA285021526511.087-0.0629No
4CYCS203007228660.970-0.0593No
5FAS4480112 611004033710.658-0.0761No
6CASP3662039757860.154-0.2036No
7MAP2K7226008664410.111-0.2371No
8RIPK1319002566520.100-0.2468No
9CRADD677052092350.028-0.3853No
10CFLAR2320605 618044011532-0.011-0.5087No
11DFFB177009211745-0.015-0.5199No
12TNF665060312392-0.029-0.5542No
13MAP3K56020041 638016212791-0.040-0.5750No
14CASP960577 1170368 206057612977-0.046-0.5842No
15CASP65690239 642055114792-0.251-0.6779No
16BIRC3655041114862-0.275-0.6773No
17FASLG281004415236-0.397-0.6912No
18FADD2360593 4210692 652001915264-0.410-0.6862No
19CASP8485015416116-0.908-0.7179Yes
20BCL2730132 1570736 2470138 3800044 4810037 5690068 5860504 665016416152-0.932-0.7052Yes
21DAXX401064716526-1.210-0.7063Yes
22MAPK8264019516851-1.569-0.6993Yes
23CHUK705073617108-1.856-0.6840Yes
24RELA383007517212-1.973-0.6588Yes
25APAF158016217235-2.015-0.6285Yes
26NFKBIA157015217856-3.162-0.6124Yes
27BAG4226007017967-3.445-0.5645Yes
28CASP2226069218179-4.097-0.5119Yes
29MAP3K14589043518190-4.158-0.4474Yes
30TRAF2590014818197-4.188-0.3823Yes
31TRAF1344073518269-4.576-0.3146Yes
32CD2473800725 572013618455-5.882-0.2327Yes
33CASP7421015618505-6.324-0.1365Yes
34TNFRSF1A1090390 652073518612-9.1190.0002Yes
Table: GSEA details [plain text format]



Fig 2: NCI_HIV-1 NEF: NEGATIVE EFFECTOR OF FAS AND TNF-ALPHA   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: NCI_HIV-1 NEF: NEGATIVE EFFECTOR OF FAS AND TNF-ALPHA: Random ES distribution   
Gene set null distribution of ES for NCI_HIV-1 NEF: NEGATIVE EFFECTOR OF FAS AND TNF-ALPHA